PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027155728.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HB-other
Protein Properties Length: 119aa    MW: 14039 Da    PI: 6.7752
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027155728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.22.5e-171165656
                    S--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
        Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                    t+t++ql +Lee++++++ypsa++r+++ + +    +++++++kvWFqNrR  +k
  XP_027155728.1 11 TYTDKQLVALEEMYAQCPYPSASQRQQMKHDClalkDVEDEKIKVWFQNRRSLDK 65
                    79*************************************************8665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MANSGSSGNI TYTDKQLVAL EEMYAQCPYP SASQRQQMKH DCLALKDVED EKIKVWFQNR  60
RSLDKLEKDN AEFHLVRERL IATHSLLKEE NDKLKQTVMD LLYENDYLQQ NCRMRVKNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.11e-27HD-ZIP family protein