PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027155857.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 160aa MW: 18562.3 Da PI: 9.3561

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027155857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.2	5.6e-23	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++ Fsvrk++ +k ++g it+r++ C k+g +++ + + +rtra t+tgC ak+ + + + + k++v++l+leHnHel XP_027155857.1 26 KFYNKYAFKMSFSVRKNYLNKD-KDGVITSRRYSCCKKGVKRKYEGD-AMPKRTRAPTKTGCGAKMIIVLFRgTMKYHVHDLVLEHNHEL 113 6***************9998.8999*********9999988.89999************9999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MDCSKLTEDK IPELGMEFNS EEDAYKFYNK YAFKMSFSVR KNYLNKDKDG VITSRRYSCC 60 KKGVKRKYEG DAMPKRTRAP TKTGCGAKMI IVLFRGTMKY HVHDLVLEHN HELHIAQCSH 120 MMPSQRKVSE VQGFQPEISK DAGFSLKQSH EFMEKETNFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-14	FAR1 family protein