PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027156005.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 255aa    MW: 29383.8 Da    PI: 10.1662
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027156005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind26.91.3e-084379238
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHH CS
    HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldeeefak 38
                    Fl+k+++++ed e++++isw+++g+s++v d+ +fa 
  XP_027156005.1 43 FLTKTFQMVEDTETNNMISWNSDGTSLIVRDHLKFAV 79
                    9******************************999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MEVRGGGIAG NGGIVRPSSL PSKQASEKMK FMKGVRGFTP PPFLTKTFQM VEDTETNNMI  60
SWNSDGTSLI VRDHLKFAVE GFRKIGLRQY EYENKWFQRG QEHFLMNIKR RNNEDPTIRK  120
RRESREQHVT AARPSMEVEL EIFEDHMNAL KEGIIRSKYH MGKLEHSIAT FKKNMKRMEA  180
KSKALIKVLA RIFSPTLVKE MIQRVEEEPE LEILQTMKRR RVILPQSSKT TTKSTDDGAC  240
GMDQDDQEAT TSMAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218222KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.17e-22HSF family protein