PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027156013.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 375aa MW: 41956 Da PI: 5.2425

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027156013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	31.9	3.5e-10	81	118	2	39
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS HSF_DNA-bind 2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39 Fl k+y+i++++e++++isws++g+sf+v+d+++fa + XP_027156013.1 81 FLLKVYDIVKNPETDSIISWSSSGTSFIVWDPHRFAAE 118 9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MEATNQETSE VTNSTKYELK NGENEEERVN PTIPMGTDVS ESSSNAIVTA AAAVFATPLA 60 KEGRANGASS SSSRVRAPPP FLLKVYDIVK NPETDSIISW SSSGTSFIVW DPHRFAAEGF 120 RKINWDRLEF QNAWFQKGKK SWLKNIKRRI QGTQNAHLCK PLETEGQLSL SGKQKKFESL 180 MQEHDALKVE MMKLKDMEEN LVKEIEILEK QAQCITSKRQ NMLKYTIHEL LIRKKKLQNN 240 DVANEQGSGG RQSIESSVEL LVEGGTSHGS RKNSPRAQSG TGKTFSNVDL STAVQEEEDC 300 TVSMGTFSNF YTTVYSSLEK QLMDDISCEN VLEEERANLR QNEVIHLEDL IEGPADWNEF 360 AKGIGTSSWC FTGLP

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MEATNQETSE VTNSTKYELK NGENEEERVN PTIPMGTDVS ESSSNAIVTA AAAVFATPLA  60
KEGRANGASS SSSRVRAPPP FLLKVYDIVK NPETDSIISW SSSGTSFIVW DPHRFAAEGF  120
RKINWDRLEF QNAWFQKGKK SWLKNIKRRI QGTQNAHLCK PLETEGQLSL SGKQKKFESL  180
MQEHDALKVE MMKLKDMEEN LVKEIEILEK QAQCITSKRQ NMLKYTIHEL LIRKKKLQNN  240
DVANEQGSGG RQSIESSVEL LVEGGTSHGS RKNSPRAQSG TGKTFSNVDL STAVQEEEDC  300
TVSMGTFSNF YTTVYSSLEK QLMDDISCEN VLEEERANLR QNEVIHLEDL IEGPADWNEF  360
AKGIGTSSWC FTGLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	149	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	9e-17	HSF family protein