PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027156293.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 253aa    MW: 28901.5 Da    PI: 7.1201
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027156293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.98e-2989176291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++g+w+vtk+++eH+H+l+p
  XP_027156293.1  89 FYNSYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMILVRKISSGRWVVTKFVKEHTHPLNP 176
                     ******************************************9988..9**************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEFEVDVDVN GEVVGSSVDI DGRTDDENAT AGSPVDGVLQ HCPDVKVDQH VSRREIVELE  60
ETQAVNSLVS NDEPYVGQEF ESEAAAHAFY NSYATRVGFI IRVSKLSRSR RDGSAIGRAL  120
VCNKEGFRMP DKREKIVRQR AETRVGCRAM ILVRKISSGR WVVTKFVKEH THPLNPGKGR  180
KDLIYDQYPN EHDKIRELSQ QLAVEKKRAA TYKRHLEMIF EHIEEHNLSL SKKIQDVVNN  240
VREIESKEHQ SHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-104FAR1 family protein