PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027156319.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 434aa MW: 48450.5 Da PI: 4.5225

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027156319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	62	1.9e-19	22	93	54	128
NAM 54 eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + wyfF+ +ky++g+r++r + g+Wk tgkdk+++ +g++vg +k+L f gekt W mheyr+ XP_027156319.1 22 NVNGWYFFTYLTNKYPKGSRPSRsCGDGGFWKPTGKDKKIYY-NGNTVGYRKSLDFLL---GPGEKTAWKMHEYRI 93 4579*****************666799*********.999*******5...45678******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MRFGVRGFLI DAHRYRSDSL HNVNGWYFFT YLTNKYPKGS RPSRSCGDGG FWKPTGKDKK 60 IYYNGNTVGY RKSLDFLLGP GEKTAWKMHE YRIHANNPKS DPVLCRLYMN IRRKNKDESE 120 GDTVELMREN LDQCLTVNEA PMQNEDNDLA VGNISSAGST NNQCMEYITS TLDTGGDAIS 180 NQVIYDLSSF QFPDHPFQDF QGYTNSHGGL EAITQEFTEP FHLSKGTMMP SNLSMEPFHL 240 SRGTMIPSDL NMEDVSKYAT GDTVELMREN LDQCLTVNEA PMQNEDNDLA VGNISSAGST 300 NNQCMEYITS TLDTGGDANS NQVIYDLSSF QFPDHPFQDF QGYTNSHGGL EAITQEFTEP 360 FHLSKGTMMP SNLSTEPFHL SRGTMIPSDL NMEDVSKYAI GGTDLSDLAW QNGCAGGYVN 420 MTSLQIDGEN SGYK

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MRFGVRGFLI DAHRYRSDSL HNVNGWYFFT YLTNKYPKGS RPSRSCGDGG FWKPTGKDKK  60
IYYNGNTVGY RKSLDFLLGP GEKTAWKMHE YRIHANNPKS DPVLCRLYMN IRRKNKDESE  120
GDTVELMREN LDQCLTVNEA PMQNEDNDLA VGNISSAGST NNQCMEYITS TLDTGGDAIS  180
NQVIYDLSSF QFPDHPFQDF QGYTNSHGGL EAITQEFTEP FHLSKGTMMP SNLSMEPFHL  240
SRGTMIPSDL NMEDVSKYAT GDTVELMREN LDQCLTVNEA PMQNEDNDLA VGNISSAGST  300
NNQCMEYITS TLDTGGDANS NQVIYDLSSF QFPDHPFQDF QGYTNSHGGL EAITQEFTEP  360
FHLSKGTMMP SNLSTEPFHL SRGTMIPSDL NMEDVSKYAI GGTDLSDLAW QNGCAGGYVN  420
MTSLQIDGEN SGYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-18	NAC family protein