PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027156508.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 408aa MW: 46085.4 Da PI: 8.7907

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027156508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.6	4.4e-31	91	144	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+e+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ XP_027156508.1 91 PRLRWTPDLHLSFVHAIERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 144 8****************************************************7 PP
2	Myb_DNA-binding	45.9	1.3e-14	92	143	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+a+++lGg t+k++ + m+ g++ ++ks++q+y+ XP_027156508.1 92 RLRWTPDLHLSFVHAIERLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 143 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MVEDSGVNAK LKSDRNEDDT AQTSPDSSLN ISSIDLNEEA SSNVDEETSS EVPDLSLVDC 60 EKSSEGNSEN YCTSVERNEK KVRQYNRSKL PRLRWTPDLH LSFVHAIERL GGQERATPKL 120 VLQLMNVRGL SIAHVKSHLQ MYRSKKLDES GQGNSNFLHL IGLAKRGMQG KGPFSGRMDQ 180 MCSPVDQFRY QNGAIVVASN PNGGNNIVNI LNNASLQSPY EAKSLSSRFQ QWSYYQDSMM 240 KSQGKSCNSS IFHAMHGATR YGPIRPSSFL EEKRWPPREF SSHHLKEKRV DPTASKWANA 300 PFQPLYNQFH QPENSAGATY FMQRANWNRR DSLTAERVET NGNNPANIVK IESPYRHQMM 360 NEHKILDGKE WLPDLQLSLS RSLGSYKDMA QNKGESDVNT RLSLSLKP

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MVEDSGVNAK LKSDRNEDDT AQTSPDSSLN ISSIDLNEEA SSNVDEETSS EVPDLSLVDC  60
EKSSEGNSEN YCTSVERNEK KVRQYNRSKL PRLRWTPDLH LSFVHAIERL GGQERATPKL  120
VLQLMNVRGL SIAHVKSHLQ MYRSKKLDES GQGNSNFLHL IGLAKRGMQG KGPFSGRMDQ  180
MCSPVDQFRY QNGAIVVASN PNGGNNIVNI LNNASLQSPY EAKSLSSRFQ QWSYYQDSMM  240
KSQGKSCNSS IFHAMHGATR YGPIRPSSFL EEKRWPPREF SSHHLKEKRV DPTASKWANA  300
PFQPLYNQFH QPENSAGATY FMQRANWNRR DSLTAERVET NGNNPANIVK IESPYRHQMM  360
NEHKILDGKE WLPDLQLSLS RSLGSYKDMA QNKGESDVNT RLSLSLKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-37	G2-like family protein