PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027156651.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 111aa    MW: 13086.8 Da    PI: 8.6169
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027156651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.33.7e-111170148
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............t 48
                    +fYn+Y+  vGFsvrk++ +k  ++g +t r+++C keg + +++++              
  XP_027156651.1 11 NFYNRYGLVVGFSVRKDYLNKD-KDGVVTLRRYTCCKEGISLKQSHElmgkeagglgnigY 70
                    6*****************9998.8999*************999888765555555555550 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MEFQSEDEAY NFYNRYGLVV GFSVRKDYLN KDKDGVVTLR RYTCCKEGIS LKQSHELMGK  60
EAGGLGNIGY TRDDLERYLR TKRERRLKYG ETGAMLRYFE ELVHYSSLFV I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-08FAR1 family protein