PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027157042.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family HSF
Protein Properties Length: 360aa    MW: 40625.7 Da    PI: 5.8207
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027157042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind31.93.6e-1080117239
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS
    HSF_DNA-bind   2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39 
                     Fl k+y+i++++e++++isws++g+sfvv+d+++fa k
  XP_027157042.1  80 FLFKVYDIVKNPETDSIISWSSSGTSFVVWDPHRFAAK 117
                     99*********************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MEANQETSEV TISTKYELKN GENEGERMNP TIPMGTNVSE SSSNAIVTAA ATVSATPLAK  60
ECYANGASSS SSWVRAPPPF LFKVYDIVKN PETDSIISWS SSGTSFVVWD PHRFAAKGFR  120
KINWDRLEFQ NAWFQKGKKS WLKKIKRRIQ GTQNAHPCKP LETKGQLSLS EEQKKFESLM  180
QEHDTLKVET MKLKDMEENL EKEMKILEKQ VQCITSKLQN MLKHTIHELL IRKKKLQSND  240
TANEQESGGR QNIESSVELL NEGETSYGSR KNSPRAQSGT GKAFSNVDLS TAVQEEENLY  300
SLLEKQLMDD ISYENVPEEK KAKLQQNDVI PLEYLIEAPA DWNEFAKGIG TSSWCFTGLP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142148LKKIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.19e-17HSF family protein