PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027157068.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

DBB

Protein Properties

Length: 243aa MW: 27514.7 Da PI: 6.9361

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027157068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.5	2.4e-07	4	45	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C+ ++ +e++ fC ++ lC+ C H+ H++ XP_027157068.1 4 QCDVCNTEEASVFCSADEAALCQACDHRVHHAnklaskhHRF 45 7****************************6445888886766 PP
2	zf-B_box	26.9	9.8e-09	55	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e ++ lfC++++ llC++C Hk Ht XP_027157068.1 55 SPFCDICQERRALLFCQQDRALLCRECDIPVHKAnqHT 92 679*****************************877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MKIQCDVCNT EEASVFCSAD EAALCQACDH RVHHANKLAS KHHRFSLLHH PLKDSPFCDI 60 CQERRALLFC QQDRALLCRE CDIPVHKANQ HTQKHDRFLL TGVRLSASSS ANQTPSSSTV 120 SYAAGSTRTA KTESKSASSV NDPHNLRANS TAKTSKSTSN HLSFEIESHW TNQEGSVATS 180 SISEYLTETL PGWHVEDFLD PPSSFPYGLQ HSCFFFFLFL FYNILSWWWN GVMLIQETWQ 240 YSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	1e-64	DBB family protein