PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027157140.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 122aa    MW: 13433.1 Da    PI: 6.2209
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027157140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.88e-1451120164
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskr 64 
                     lp+G++F+Ptd+el+ e+L++kvegk+      ++++  +i+   +i++++P++Lp  v+ +  + +fF++ 
  XP_027157140.1  51 LPAGVKFDPTDQELI-EHLEAKVEGKEskshplIDEFIpTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRP 120
                     799************.99*********6665443333333666646**********.555566788999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MNKSLQSHQL GSGISSSDLI DAKLEEHQLC GSKHCPGCGH KLDGKPDWVG LPAGVKFDPT  60
DQELIEHLEA KVEGKESKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLSRHFFHRP  120
SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.13e-67NAC family protein