PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027157249.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 190aa MW: 22726.6 Da PI: 9.6415

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027157249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.3	3.6e-15	11	101	1	94
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k l+ +d +++ +++p +f++++ +++++++++ +++ +sW v++ rkk++ y+ + W +Fvk+++Lk gD ++F+l+++++f XP_027157249.1 11 FIKLLM-EDDFTRE-IRIPYSFVRNFkeKLPSRCTIESEAKNSVRNSWPVRI--RKKGRYyYICRLSWPKFVKDHHLKLGDYLLFHLIDKTTF-- 99 566664.4555555.8*****9888888888888888888888***..888888677889*******************987766.. PP EE CS B3 93 vv 94 +v XP_027157249.1 100 RV 101 44 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MEQNYNFNPS FIKLLMEDDF TREIRIPYSF VRNFKEKLPS RCTIESEAKN SVRNSWPVRI 60 RKKGRYYYIC RLSWPKFVKD HHLKLGDYLL FHLIDKTTFR VKPYGADCCP KKFNVYNSSS 120 SSSDDESDDG SDESFDDSDE TEFYRDDGIR PSKVHPAKKK VYTKYQIDRD NFRSNKFKKL 180 RKTRKSGEMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09780.1	4e-09	B3 family protein