PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027157484.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 219aa    MW: 24427.9 Da    PI: 6.7101
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027157484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3536.1e-1735125199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v k  +l+lp+ f++ h  +   ++t++lede+ +++  k+    ++++  l++GW +F  a++L egD++vF++++    +l+v 
  XP_027157484.1  35 FVKPMIRSNVKKGFWLSLPRLFCKLHLPD--HDTTIVLEDENRKEYITKY--LAQRRG--LSAGWMGFSIAHKLVEGDVLVFHMVN--ANKLKVY 121
                     89*********************999433..5679***************..666655..9**********************765..5556898 PP

                     EE-S CS
              B3  96 vfrk 99 
                     v+r+
  XP_027157484.1 122 VIRS 125
                     8886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MVGMHDLCGQ IKVTSSVMQR AEAVQETLDA KFPSFVKPMI RSNVKKGFWL SLPRLFCKLH  60
LPDHDTTIVL EDENRKEYIT KYLAQRRGLS AGWMGFSIAH KLVEGDVLVF HMVNANKLKV  120
YVIRSSRLAE VDAALCLLQL EGPATGNESG HRGDDCGDPQ PTGEKSKSCS QPECENISDK  180
DMLDNNLGLV MGRPESIDEH LQLALEGRRG SFSGLHYRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.19e-38B3 family protein