PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027157522.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 297aa MW: 33286.5 Da PI: 7.5956

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027157522.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.2	1.7e-14	95	138	8	55
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er RR++++s f++L++llP++ +K +K++i+ +Av+YI+sLq XP_027157522.1 95 TERERRKKMRSMFSNLQSLLPQL----PPKADKSTIVDEAVNYIRSLQ 138 7*******************6....39****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MSEGGSHDNF LWDNEVWALS NSDNSGRSDE NQPAKKFSES NNSNCPTPRE AEPGVGPSLG 60 KRKRKNGKQP SVEGNDQAAE GKGSAGADHE LHIWTERERR KKMRSMFSNL QSLLPQLPPK 120 ADKSTIVDEA VNYIRSLQQT LQRLQKQKLE MIRGLTTINY DPSMITPHRL AMDSREAFLA 180 DQGSSSQLSS NPNPLGVARF PTSFRTWATP NMVLNVCGDK AHINICCPKK LGLFSAICYF 240 LEKHKLEVVS AHVSSDNYRS LYMIQAQALD HQYPEAFSFD DIFHLATGEM MMYMSSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	7e-41	bHLH family protein