PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027157713.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 207aa    MW: 23207.1 Da    PI: 5.8672
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027157713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.9e-20103154256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrdp++ g   r++lg++ t+e+Aa a+++a+ +++g+
  XP_027157713.1 103 RYRGVRRRP-WGKFAAEIRDPKKKG--SRIWLGTYETPEDAALAYDQAAFEMRGA 154
                     59*******.**********96643..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MMQEATSMDS DLALLSFFEN HLLNDSDFQD IISEINCYDP PICNPSTSFG SSHLFGSGIE  60
MISNTSTSNN SSETEGNLDQ LCEEVNQKPV PARGRQAPVE WIRYRGVRRR PWGKFAAEIR  120
DPKKKGSRIW LGTYETPEDA ALAYDQAAFE MRGAKARLNF PNLFGSNTLQ PVRVNPRKRS  180
LEPSVSCCST EKDVPKKGKF EVSSMMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-45ERF family protein