PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027157973.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 234aa    MW: 26290 Da    PI: 4.5573
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027157973.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-1991141356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+++AeIrd + ng   r+++g+f+taeeAa  +++a+ +l+g+
  XP_027157973.1  91 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWIGTFDTAEEAALVYDQAAFALRGH 141
                     9*******.**********44465..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDYSSFPQHS FAEFPPESSA SSSMYCDNSQ HCQSSLPFNE NDSQEMLLAR VISEAAGSGN  60
SMDAPSSSRI KEEEECAQQN DYDEPMNQVS YRGVRRRPWG KYAAEIRDST RNGVRVWIGT  120
FDTAEEAALV YDQAAFALRG HAAVLNFPVE VVYESLKQMQ YGFEEGCSPV LVMKKRHSMN  180
RRNALSKKRS QVLMGLDDDN NNNVLVLEDL GTDYLEELLG ASESTSSSCP WRHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-57ERF family protein