PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027158095.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 476aa MW: 53888.7 Da PI: 8.1127

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027158095.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.8	2e-19	201	288	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YAk+vGF +++s+ +k ng++++r f+Cs egkr+++k++ + r +r+etr + ak+kv+ +++gk+++ +l e nH l+ XP_027158095.1 201 NFYLAYAKDVGFGIKRSSFHKD-SNGKVMDRVFCCSAEGKRAKDKRD-LNVRAHRPETRFNSSAKMKVNSRQTGKFRICQLIIEYNHYLS 288 6**************98887.8888*************999.9999*********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MSSRSDTKKK RGSEWNGKSA ENLGSSSLMP IAVGYKPDVR IFEERKSKAL AVYGNDSKSL 60 ILLIAWLPAT LSVVFVYMIC EMKVVRQPNQ LSIFYYFLFV SIALALFLMV IIILQKAVAF 120 SQAAYTGSAT VDMDATTSME TEASPCRRLD FDKVDQITND EVSTPPVLNV IKDVNKIHAS 180 IPLELLPKMD MEFESEDDAY NFYLAYAKDV GFGIKRSSFH KDSNGKVMDR VFCCSAEGKR 240 AKDKRDLNVR AHRPETRFNS SAKMKVNSRQ TGKFRICQLI IEYNHYLSSP NKTHLHRSHR 300 KINSIHAAEI DMAYRVGIAL KVSYELMALQ AGGRENLGFI PEDYKNYLRS KRTIQMDVGD 360 TGGVLEYLQK MQLEDPNFFH AIQVDEDALI TNIFWTDGLM RVDFASFGDV VCFDTTYRKN 420 NEGRPFALFV GVNNHKQTAI FGAALLYDET ASTFEWLFDT FVRGMSGKNP NTILTD

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MSSRSDTKKK RGSEWNGKSA ENLGSSSLMP IAVGYKPDVR IFEERKSKAL AVYGNDSKSL  60
ILLIAWLPAT LSVVFVYMIC EMKVVRQPNQ LSIFYYFLFV SIALALFLMV IIILQKAVAF  120
SQAAYTGSAT VDMDATTSME TEASPCRRLD FDKVDQITND EVSTPPVLNV IKDVNKIHAS  180
IPLELLPKMD MEFESEDDAY NFYLAYAKDV GFGIKRSSFH KDSNGKVMDR VFCCSAEGKR  240
AKDKRDLNVR AHRPETRFNS SAKMKVNSRQ TGKFRICQLI IEYNHYLSSP NKTHLHRSHR  300
KINSIHAAEI DMAYRVGIAL KVSYELMALQ AGGRENLGFI PEDYKNYLRS KRTIQMDVGD  360
TGGVLEYLQK MQLEDPNFFH AIQVDEDALI TNIFWTDGLM RVDFASFGDV VCFDTTYRKN  420
NEGRPFALFV GVNNHKQTAI FGAALLYDET ASTFEWLFDT FVRGMSGKNP NTILTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-58	FAR1 family protein