PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027158597.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 234aa MW: 25914.8 Da PI: 9.532

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027158597.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.8	5.3e-10	55	100	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ + f+ L ++lP + kK++K ++L A++ +k+Lq XP_027158597.1 55 HIMAERKRRKHLGQLFSSLSSILPGL-----KKMDKTSVLGDAINQLKHLQ 100 999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MLLTFGTLNP GEDKVCDVLT SNGSFVKFDH RTTGIQKRGK RTGGRTRSPS QTYDHIMAER 60 KRRKHLGQLF SSLSSILPGL KKMDKTSVLG DAINQLKHLQ EKVKTLEEQV TKQTVESVVL 120 VKKSQFLVAD DVSSDERGCN NNNQLVFPQI EAKVCDKEVL LKVHCENHQP GVLIKLLSKA 180 EKLNLAVTNT SVTPFGSSAL EVTIIAEMEK EFNMTTKELA KNLGSALHLV AQES

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	85	KRRKHLGQLFSSLSSILPGLKKMDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-48	bHLH family protein