PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027158767.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 367aa    MW: 40151.5 Da    PI: 5.0043
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027158767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.41.2e-15207243135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_027158767.1 207 CQHCGVSEksTPAMRRGPGGPRTLCNACGLMWANKGT 243
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MASTMNGRRR HTRPYKDRYV NVPFQVDEDG SAGGFDADDI GAVDERINSG AREMRAVNSM  60
PIATILTSPG GAPMASRTSE LTISFEGEVY VFPAVPPEKV QAVLLLLGGR DVPRSIPSSE  120
FLLQQNCKTT DDGSSQPNVS RRIASLVRFR EKRKERCFEK KIRYTCRKEV AQRMHRRNGQ  180
FASLKDAGKA AENWESGEGT PHQEHVCQHC GVSEKSTPAM RRGPGGPRTL CNACGLMWAN  240
KGTLRDLTKG GRSACFDQSD PETPEMKASS MEPENSYHNQ DEEGSSEDAK PMFVESGCPS  300
LRPNAQDLLE TAQGLSGDSP VGLGNSSINL DGQQETLDEL ANASGTEFEI PSNFDEQVWL  360
SSNADLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.23e-57GATA family protein