PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027159886.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 869aa MW: 95536.5 Da PI: 8.3875

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027159886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.6	5.3e-19	338	437	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_027159886.1 338 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDLKGKEWVFQFRFwpNNNSRMYVLE-GITPCIQSMQLQAGDVVTFSRIE-PEGK 430 89************************555566778***********99899999999.*******************887.5665 PP .EEEEE- CS B3 92 lvvkvfr 98 lv++ ++ XP_027159886.1 431 LVMGCRK 437 6665554 PP

Sequence ? help Back to Top
Protein Sequence Length: 869 aa Download sequence
MAASAAASTA SLAKFCFNSN CKETLERPRK GWRRRTGEFA DLCDRCASAY EDGKFCESFH 60 LDASGWRCCE SCGKQIHCGC IVSFHMFVLL DAGGIECITC ARKSFILTPN PAWPPPSLFL 120 PLQPERIKDI SVKNWSPIAG SGPVPWRQAP SLFNGSAIQS ELQPRVPTPI EFDVSGGVDR 180 LQLNERLSSS LEKKKKEESF ERFMNGSLRI CSSEFGSGTS GAMGKEQSFP FSNASPQTGY 240 PSTSDFSVAT APALENGSNN HTKVSGTLIQ QTTQPTPSEK RPCGHNPADS SEGQPRNGRA 300 RPEVRARSQL LPRYWPRITD QELQQISGDS NSVITPLFEK MLSASDAGRI GRLVLPKKCA 360 EAYFPPISQP EGLPLKVQDL KGKEWVFQFR FWPNNNSRMY VLEGITPCIQ SMQLQAGDVV 420 TFSRIEPEGK LVMGCRKASC APSDQGNEAS NAGQGYSSNG DVAPKSNKAG EITKPGELVS 480 TNSRMKGYSA SSSCPSLNRA AAKSGSTWPE LDKRVHVAKV VEAKPAVRSK RKNSTLGLKS 540 KRLRIENEDM LELKVTWEQV QGLLRPPPNK APSVFVIEGC EIEEYEDAPV IGRPTIPGTD 600 HQGKKIQWAQ CEECSKWRKI PADALLPSKW TCSQNLWDPE RSLCSTVQEL SMEKLQDLLP 660 AISKTASKKI RAPKQDPDSV EALEGLDALA NLAIQEKSGS FQASQATTKH PRHKAGCSCI 720 VCIQPPSGKG PKHKQPCDCI VCKSLKRRHK TMMLKKEKNL TEKIPETSDQ MLNMQELPEQ 780 VPNGLVNKSP KEEVVSDEGC IDNPDEMCSA LPFKGQIDLN IQPEKEEELS PSFCSGNIPR 840 SMLETRERHN RQQRLSASSG RGSLVGNQT

Sequence ? help Back to Top

Protein Sequence Length: 869 aa Download sequence

MAASAAASTA SLAKFCFNSN CKETLERPRK GWRRRTGEFA DLCDRCASAY EDGKFCESFH  60
LDASGWRCCE SCGKQIHCGC IVSFHMFVLL DAGGIECITC ARKSFILTPN PAWPPPSLFL  120
PLQPERIKDI SVKNWSPIAG SGPVPWRQAP SLFNGSAIQS ELQPRVPTPI EFDVSGGVDR  180
LQLNERLSSS LEKKKKEESF ERFMNGSLRI CSSEFGSGTS GAMGKEQSFP FSNASPQTGY  240
PSTSDFSVAT APALENGSNN HTKVSGTLIQ QTTQPTPSEK RPCGHNPADS SEGQPRNGRA  300
RPEVRARSQL LPRYWPRITD QELQQISGDS NSVITPLFEK MLSASDAGRI GRLVLPKKCA  360
EAYFPPISQP EGLPLKVQDL KGKEWVFQFR FWPNNNSRMY VLEGITPCIQ SMQLQAGDVV  420
TFSRIEPEGK LVMGCRKASC APSDQGNEAS NAGQGYSSNG DVAPKSNKAG EITKPGELVS  480
TNSRMKGYSA SSSCPSLNRA AAKSGSTWPE LDKRVHVAKV VEAKPAVRSK RKNSTLGLKS  540
KRLRIENEDM LELKVTWEQV QGLLRPPPNK APSVFVIEGC EIEEYEDAPV IGRPTIPGTD  600
HQGKKIQWAQ CEECSKWRKI PADALLPSKW TCSQNLWDPE RSLCSTVQEL SMEKLQDLLP  660
AISKTASKKI RAPKQDPDSV EALEGLDALA NLAIQEKSGS FQASQATTKH PRHKAGCSCI  720
VCIQPPSGKG PKHKQPCDCI VCKSLKRRHK TMMLKKEKNL TEKIPETSDQ MLNMQELPEQ  780
VPNGLVNKSP KEEVVSDEGC IDNPDEMCSA LPFKGQIDLN IQPEKEEELS PSFCSGNIPR  840
SMLETRERHN RQQRLSASSG RGSLVGNQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-148	B3 family protein