PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027160513.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 347aa MW: 37428.8 Da PI: 8.2883

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027160513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	5.9e-39	81	141	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+s+ntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ XP_027160513.1 81 PEAALKCPRCESANTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 141 67899*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MVFSSVPVYL DPPNWPQKIF DASGFTFLQQ QNPQQVAGDG ENSQFPPPLM PPPPPPGAGG 60 TASIRPGSMA ERARLSKLPQ PEAALKCPRC ESANTKFCYF NNYSLTQPRH FCKTCRRYWT 120 RGGALRNVPV GGGCRRNKRS KGSRSKSPMT SDNQSSNSTS TSAVSANNSC STDVMSRLPP 180 PPPLSFFPPL HNLADFSNVD IGMSFGGIHP TVTTRAGAGS EIEFQIGNPL GAGPLNLSSR 240 FADQWRLQQV QQLPFLGGLE HSAAAGVYHL EGEVIDQPLG YDGVTTDQLT SKTLEAHGGS 300 VKLEENHQGL NLSRNFLSIP GNDQYWSTTA NAWTDLSGST SSASHFM

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MVFSSVPVYL DPPNWPQKIF DASGFTFLQQ QNPQQVAGDG ENSQFPPPLM PPPPPPGAGG  60
TASIRPGSMA ERARLSKLPQ PEAALKCPRC ESANTKFCYF NNYSLTQPRH FCKTCRRYWT  120
RGGALRNVPV GGGCRRNKRS KGSRSKSPMT SDNQSSNSTS TSAVSANNSC STDVMSRLPP  180
PPPLSFFPPL HNLADFSNVD IGMSFGGIHP TVTTRAGAGS EIEFQIGNPL GAGPLNLSSR  240
FADQWRLQQV QQLPFLGGLE HSAAAGVYHL EGEVIDQPLG YDGVTTDQLT SKTLEAHGGS  300
VKLEENHQGL NLSRNFLSIP GNDQYWSTTA NAWTDLSGST SSASHFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28810.1	2e-39	Dof family protein