PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027163614.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family MYB_related
Protein Properties Length: 95aa    MW: 11180.7 Da    PI: 7.6114
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027163614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.51.8e-093069445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +T++E++l+++ +k+ G + W++Ia +++ gR ++++  +w+
   XP_027163614.1 30 MTEQEEDLIYRMHKLVGDR-WALIAGRIP-GRKPEEIERFWL 69
                     7****************99.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MDDGRAKQRK IVKSCSYEEV SSIAWDFINM TEQEEDLIYR MHKLVGDRWA LIAGRIPGRK  60
PEEIERFWLM KHSEGFANKQ REDPKDHSKI ISSSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.13e-37MYB_related family protein