PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027164902.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 233aa    MW: 25964.4 Da    PI: 9.8223
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027164902.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000136486123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_027164902.1 64 YSCSFCKREFRSAQALGGHMNVH 86
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MERNSARGNS GGRSMKEMNN NNNSHKKNAG CYKVKNPPWD FLNDCNGTEE ADLLGLFSWP  60
PRSYSCSFCK REFRSAQALG GHMNVHRRDR ARLRQSPPRD GQYSLLNLNL EPNPNFSTFN  120
TNPSPSARCP LMPSTFPSPI PPPVSTISTT PPATVTGMRK WGDKAGGGVH QLSHSYPKDQ  180
DLMKSKATKR LLELHEKEGS LLKRGDIVKL ELEIGLVGEA KQDLDLELRL GYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.17e-25C2H2 family protein