PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027164944.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CAMTA

Protein Properties

Length: 893aa MW: 101340 Da PI: 7.1203

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027164944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.8	7.2e-52	25	141	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e k rwl+++ei+aiL n+++++++ ++ + p+sg+++L++rk++r+frkDG+swkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf r XP_027164944.1 25 EEaKGRWLRPNEIHAILCNYKHFNVQVKPVNLPPSGTIVLFDRKMLRNFRKDGHSWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFVR 119 45599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le++vlvhy+e++ XP_027164944.1 120 RCYWLLDKSLEHVVLVHYRETQ 141 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 893 aa Download sequence
MAAIAGPEIH GFRTMKDLDI GNILEEAKGR WLRPNEIHAI LCNYKHFNVQ VKPVNLPPSG 60 TIVLFDRKML RNFRKDGHSW KKKKDGKTVK EAHEHLKVGN EERIHVYYAH GEDNPTFVRR 120 CYWLLDKSLE HVVLVHYRET QEGSPSTPLN SNSSSALSDP SQSLVISEES DSAADRAYYS 180 RERADLDPNC SVNIKDHELR LHEINTLEWD ELLVQDDPNK LIGPQEGKYS SELSYQYDMN 240 GYGITGDSIS DNKLPVESYL EKFPGQVSMN NSGNLNVPAN LCFQTMGAPT ANLLLKDSEQ 300 MTLFAGDSLE HASKDGLQTQ DSFGKWISNV IADSPLPLDD TKIFNITEIS PSWALSSEET 360 KILVVGYFHE GQSNLAKSNL FCICGNACTR AEPVQSGVFR CVVSPQAPAF VNLFLSFDGH 420 TPISQVVMFE FRGPIVDNPA ISEERSSWEE FEVQMRLAHL LFSTSRSFNI LSTKVTPTAL 480 KEAKNFARKT SHIKNHWEFL TKSIKAKEIS FPDAKNCLFE LTLQNRLLEW LLERVAEGCQ 540 ISERDEQGLG VIHLCAILGY TWAVYPFSWS GLSIDYRDKF GWTALHWAAY YGREPMVAKL 600 LTAGAKANLV TDPTSENPGG FTAADLASKN GHEGLGAYLA EKALVQHFQD MTLAGNVSGS 660 LHTAKSDSVE PGNFSEDELY LKDTLAAYRT AADAAARIQA AFREHSLKVQ TLAVESSNPE 720 IEARNIVAAM KIQHAFRNFE TRKKMAAAAR IQHRFRTWKM RRDFLNMRRQ AIRIQAVFRG 780 FQVRKQYRKI IWSVGVLEKA ILRWRLKRKG FRGLHVNPDE VVNNQKEEND VEEDFFRASR 840 KQAEERVERS VVRVQAMFRS KLAQEEYRRM KLAHNNAARE YEEFENPDGM RQD

Sequence ? help Back to Top

Protein Sequence Length: 893 aa Download sequence

MAAIAGPEIH GFRTMKDLDI GNILEEAKGR WLRPNEIHAI LCNYKHFNVQ VKPVNLPPSG  60
TIVLFDRKML RNFRKDGHSW KKKKDGKTVK EAHEHLKVGN EERIHVYYAH GEDNPTFVRR  120
CYWLLDKSLE HVVLVHYRET QEGSPSTPLN SNSSSALSDP SQSLVISEES DSAADRAYYS  180
RERADLDPNC SVNIKDHELR LHEINTLEWD ELLVQDDPNK LIGPQEGKYS SELSYQYDMN  240
GYGITGDSIS DNKLPVESYL EKFPGQVSMN NSGNLNVPAN LCFQTMGAPT ANLLLKDSEQ  300
MTLFAGDSLE HASKDGLQTQ DSFGKWISNV IADSPLPLDD TKIFNITEIS PSWALSSEET  360
KILVVGYFHE GQSNLAKSNL FCICGNACTR AEPVQSGVFR CVVSPQAPAF VNLFLSFDGH  420
TPISQVVMFE FRGPIVDNPA ISEERSSWEE FEVQMRLAHL LFSTSRSFNI LSTKVTPTAL  480
KEAKNFARKT SHIKNHWEFL TKSIKAKEIS FPDAKNCLFE LTLQNRLLEW LLERVAEGCQ  540
ISERDEQGLG VIHLCAILGY TWAVYPFSWS GLSIDYRDKF GWTALHWAAY YGREPMVAKL  600
LTAGAKANLV TDPTSENPGG FTAADLASKN GHEGLGAYLA EKALVQHFQD MTLAGNVSGS  660
LHTAKSDSVE PGNFSEDELY LKDTLAAYRT AADAAARIQA AFREHSLKVQ TLAVESSNPE  720
IEARNIVAAM KIQHAFRNFE TRKKMAAAAR IQHRFRTWKM RRDFLNMRRQ AIRIQAVFRG  780
FQVRKQYRKI IWSVGVLEKA ILRWRLKRKG FRGLHVNPDE VVNNQKEEND VEEDFFRASR  840
KQAEERVERS VVRVQAMFRS KLAQEEYRRM KLAHNNAARE YEEFENPDGM RQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein