PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027165056.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 169aa    MW: 18047.1 Da    PI: 10.4809
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027165056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.54.2e-193670135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  XP_027165056.1 36 CTDCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 70
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MVDLSDKVSE SEDMNSQAQT PERVSSSSDG TQIKTCTDCG TTKTPLWRGG PAGPKSLCNA  60
CGIRSRKKRR ALLGLNKEEK KPKKSTSSSS SNNNNNNSSS TSNNYSSGSG DSNSSSGFSL  120
KRKLLSFGRD VVVPLQRPRS STNGQRRKLG EVEQAAFLLM ALSCGSVYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.11e-34GATA family protein