PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027165305.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 407aa MW: 43900.9 Da PI: 8.9449

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027165305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.7	6.3e-11	333	378	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L++l+P+ +k s a++L +Av++Ik Lq XP_027165305.1 333 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIKGLQ 378 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MYPSSTSSSS QGSMGPNGGS STGGLIRYGS APSSLLATAA DSVTNPSSRE FSALGSSHNL 60 HMGPTSSSSS RFFPSSETSS LTSESTCKTS NSNPREKGPN ISSGLHRAFG FKQDNHQGSI 120 IGGAGGAGMV SSSSSSTATT ASPLVRHSSS PPGFLNHLTH ACASNEDNGA QSYELVRLIN 180 TQFVIYHTLK FIVIIKCFPI ARTHDISRLN SQLSFTHQET LSQISEETEN VDNGLNSENE 240 KRKSAHTYSN VSYGVGPWED ANTIMFSMGP TSKRAKSMSG DIVNLNSMET QFQFGMPQTM 300 LDMSSMDKLL NIPQDSVPCK IRAKRGCATH PRSIAERERR TRISGKLKKL QDLVPNMDKQ 360 TSYADMLDLA VQHIKGLQNQ VQRLHKELDN CTCGCRKPQD SCRGGKS

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MYPSSTSSSS QGSMGPNGGS STGGLIRYGS APSSLLATAA DSVTNPSSRE FSALGSSHNL  60
HMGPTSSSSS RFFPSSETSS LTSESTCKTS NSNPREKGPN ISSGLHRAFG FKQDNHQGSI  120
IGGAGGAGMV SSSSSSTATT ASPLVRHSSS PPGFLNHLTH ACASNEDNGA QSYELVRLIN  180
TQFVIYHTLK FIVIIKCFPI ARTHDISRLN SQLSFTHQET LSQISEETEN VDNGLNSENE  240
KRKSAHTYSN VSYGVGPWED ANTIMFSMGP TSKRAKSMSG DIVNLNSMET QFQFGMPQTM  300
LDMSSMDKLL NIPQDSVPCK IRAKRGCATH PRSIAERERR TRISGKLKKL QDLVPNMDKQ  360
TSYADMLDLA VQHIKGLQNQ VQRLHKELDN CTCGCRKPQD SCRGGKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05805.1	2e-63	bHLH family protein