PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027165629.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NF-YB

Protein Properties

Length: 184aa MW: 21107.4 Da PI: 5.4635

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027165629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	42.8	1.3e-13	66	159	7	95
NF-YB 7 flPianvsrimkkvl...Panakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 +lP + v r++k l a++ is ++a + e fi ++t+ a+d c++ +r+ in++d++ al ++ f ++v++l+++l+++r+ ++ XP_027165629.1 66 ELPKTIVLRLVKDKLsqlSAESEISvfREALQAFSESGRIFIHYLTAAANDICKESNRQIINAEDVFKALEEIDFPEFVQSLRAFLEEFRQRNA 159 6888889999997651115667776447999999********************************************************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MAQLFIKTTR KQFRVKLMIP IIKGIISDTS PEVSDRMVEK EKEKEKAKEN GEVTTVTEST 60 ARELEELPKT IVLRLVKDKL SQLSAESEIS VFREALQAFS ESGRIFIHYL TAAANDICKE 120 SNRQIINAED VFKALEEIDF PEFVQSLRAF LEEFRQRNAS QTFFFGLVLV FLKSFIGPIA 180 LSFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	1e-32	NF-YB family protein