PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027166223.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 255aa    MW: 29191 Da    PI: 5.0628
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027166223.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.13.6e-1069119152
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkteker 52 
                     +fY +YAkevGF +++s+ +k   ng+ ++r f+Cs eg++e+ kk + ++r
  XP_027166223.1  69 NFYLAYAKEVGFGIKRSSFHKD-SNGRLMDRVFCCSAEGNEERIKKISISHR 119
                     6****************98887.8888************9998877644444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDATTSMETE VSSYRRLDFD KVDQITNDEV STPPVLNVIK DVNKIHASIP PELLPKMGME  60
FENEEDACNF YLAYAKEVGF GIKRSSFHKD SNGRLMDRVF CCSAEGNEER IKKISISHRK  120
INSIHAAEID MAHHVGITPK VSHELMALQV GERENLGFIP EDYRNYLRSK RTIQMDVGDT  180
GSVLEYLQKM QLEDPNFFYA IQVDQDALIT NIFWTDGLMR VDYASFGDVV CFDTTYRKNN  240
EGRPFVLFVG VNNHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-25FAR1 family protein