PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027166447.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 132aa    MW: 15186.2 Da    PI: 8.1908
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027166447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.61.9e-082163144
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreee 44
                    +fYn+Y+  vGFsvrk++ +k  ++g +t+r + C    +++++
  XP_027166447.1 21 NFYNRYGLIVGFSVRKDYLNKD-KDGVVTSRSLECAHMMRSQRK 63
                    6*****************9998.8999********987666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MEEALCPKIS MEFQSEDEAY NFYNRYGLIV GFSVRKDYLN KDKDGVVTSR SLECAHMMRS  60
QRKVSISQGA QAEIANDVGI SLKQSHELMR KEAGGLGNIG YTRDDLKHYL RTKRERGLKY  120
GETSAMLRYF EE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-07FAR1 family protein