PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027166691.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 905aa MW: 104234 Da PI: 7.3251

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027166691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.9	3.5e-23	92	179	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA ++GFsvrk++ +k ++g +t+r++ C keg +++ + + + +rtra t+tgC ak+++ + + + k++v++++leHnHel XP_027166691.1 92 QFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYRVHDIVLEHNHEL 179 6***************9998.8999************9999.999***************999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 905 aa Download sequence
MDCNKLAEDR TPELEMEFNS EEDAYKFYNN YAFKTDFNVC KDYLTKDKDG VTTSRRYSSC 60 KEGSEVMDCS KLAEDGTPEL GMEFNSEEDA YQFYNKYAFK MGFSVRKDYL NKDKDGVTTS 120 RRYSCCKEGV KRKYEGDVMP KRTRAPTKTG CGAKMVIVLF RGTMKYRVHD IVLEHNHELH 180 IVQCAHMMPS QRKVSEAQGF QAEISEDAGL SLKQSHELMG KEAGGMGNVG YTREDLKRYL 240 RTRRERSLKY GEAGSMLNYF QEQTLENPSF FHAVQLDCEE QITNIFWADA GMLIDYKFFG 300 DVVTFDTTYK TNKEYRPLGV FVGFNQHRQI VIFGAALMYD ETIDSFKWVF GTFLEAMCGK 360 RPSTILTDQD HAMAAALSVV MPETFHGLCT FHIRRNFMKH LGNHYKENSD LPYMFGACMY 420 EFEEVEQFNR VWEAMVKKHD LENNEWLSGL YRIRDKWARC MMKERWTAGM RSTQLSESLN 480 AAIKNHLKLD HDLVQFFRHF NRVVDEKRHN ELIAEYEMRQ KLPMVGLRQT PMLVHASETY 540 SPTVFVAFQN EYGESTAMVI LRQQDAAMIV EFAVMRYDGG PERIVVFNRN DLSVRCSCKK 600 YENEGILCGH ALKVFDTVGI KIIPPEYIKR RWTKRARAGD CFDRRRREVV ADPKIMISTR 660 YRELAPAMIK VATRAAMSED TSKVAITVIS DLAKRVELLL SESEEQPLQN QKNLNMEERD 720 KIEIVNEMGE AVVARGIKKR GGGKKSRVMR SWIDKFDRVK RKSRLSRTTQ TTASESEPTS 780 VSIEEYMFMG CRSSTDSVST HSMSQTVNGP PNAIAPNIDE SETGHRLANQ GPPRSVPTEW 840 MHPRFSIFSK YNSVRDVLME ERAALLTHCD VDAYHVFAPS PQGRNNTQGL QLRADVAAPE 900 NEIDE

Sequence ? help Back to Top

Protein Sequence Length: 905 aa Download sequence

MDCNKLAEDR TPELEMEFNS EEDAYKFYNN YAFKTDFNVC KDYLTKDKDG VTTSRRYSSC  60
KEGSEVMDCS KLAEDGTPEL GMEFNSEEDA YQFYNKYAFK MGFSVRKDYL NKDKDGVTTS  120
RRYSCCKEGV KRKYEGDVMP KRTRAPTKTG CGAKMVIVLF RGTMKYRVHD IVLEHNHELH  180
IVQCAHMMPS QRKVSEAQGF QAEISEDAGL SLKQSHELMG KEAGGMGNVG YTREDLKRYL  240
RTRRERSLKY GEAGSMLNYF QEQTLENPSF FHAVQLDCEE QITNIFWADA GMLIDYKFFG  300
DVVTFDTTYK TNKEYRPLGV FVGFNQHRQI VIFGAALMYD ETIDSFKWVF GTFLEAMCGK  360
RPSTILTDQD HAMAAALSVV MPETFHGLCT FHIRRNFMKH LGNHYKENSD LPYMFGACMY  420
EFEEVEQFNR VWEAMVKKHD LENNEWLSGL YRIRDKWARC MMKERWTAGM RSTQLSESLN  480
AAIKNHLKLD HDLVQFFRHF NRVVDEKRHN ELIAEYEMRQ KLPMVGLRQT PMLVHASETY  540
SPTVFVAFQN EYGESTAMVI LRQQDAAMIV EFAVMRYDGG PERIVVFNRN DLSVRCSCKK  600
YENEGILCGH ALKVFDTVGI KIIPPEYIKR RWTKRARAGD CFDRRRREVV ADPKIMISTR  660
YRELAPAMIK VATRAAMSED TSKVAITVIS DLAKRVELLL SESEEQPLQN QKNLNMEERD  720
KIEIVNEMGE AVVARGIKKR GGGKKSRVMR SWIDKFDRVK RKSRLSRTTQ TTASESEPTS  780
VSIEEYMFMG CRSSTDSVST HSMSQTVNGP PNAIAPNIDE SETGHRLANQ GPPRSVPTEW  840
MHPRFSIFSK YNSVRDVLME ERAALLTHCD VDAYHVFAPS PQGRNNTQGL QLRADVAAPE  900
NEIDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	629	647	KRRWTKRARAGDCFDRRRR
2	643	648	DRRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-110	FAR1 family protein