PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027167019.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 209aa    MW: 22755.2 Da    PI: 8.0371
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027167019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.5e-055779123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C++ F ++  L  H++ H
  XP_027167019.1 57 FECQYCHRQFANSQALGGHQNAH 79
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MAESSNQSSS ASTADPTEAL DLSLTASPSV VKLFGFPVTQ WGRSALGAHQ NADSKRFECQ  60
YCHRQFANSQ ALGGHQNAHK KERQRLKRVQ FMNDQYLPKF GDASASHDTM INQHAARSGP  120
FLYSTAPPCA TSIGPYIGPH LGSSAAHQYS FAHPPQVLSG IPIRYPCATN YVGRSEQAEV  180
NHLQRATVRS SKSSSVSEIN DEVDVDLHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.11e-12C2H2 family protein