PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027167113.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 158aa    MW: 17792.5 Da    PI: 7.6586
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027167113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-201364256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdp+ +g  +r +lg+f taeeAa+a+++a+ +l+g+
  XP_027167113.1 13 RYRGVRRRP-WGKYAAEIRDPTRQG--ARLWLGTFETAEEAARAYDKAAFNLRGH 64
                    6********.**********96544..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MQGKEEKEKE DVRYRGVRRR PWGKYAAEIR DPTRQGARLW LGTFETAEEA ARAYDKAAFN  60
LRGHLAILNF PNEYYSQLPS PPHYQPFSSS SSSAFSSSFF SRSSASSSSS GAIQGFDQRG  120
SSSSSSTGQQ KQVIEIEYLD DSLLEELLEF EEKKKNGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-31ERF family protein