PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027167169.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 257aa    MW: 28170.8 Da    PI: 6.7244
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027167169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-09143190455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +  + ++YI+sLq
  XP_027167169.1 143 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVIDEIINYIQSLQ 190
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDPPIVSHSS FSPAHASSSY TLTDLWPFPI GPPAVLGLPM PPALPPPHAT PPPVAALSLE  60
ESTVTDLSAC RTNATNKRKH NNANVKRMKA SEGGIGEQID ESKAEPQTSS YTTNKPADHD  120
DTNPQPPKDY IHVRARRGQA TDSHSLAERA RREKISERMK ILQDLVPGCN KVIGKALVID  180
EIINYIQSLQ RQVEFLSMKL EAVNSRMNSA IEGFPSKELA APQFDAAAMI FGQQAPREYA  240
PDEWLHMQVG SSFERAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-70bHLH family protein