PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027167719.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 498aa MW: 53764 Da PI: 7.3682

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027167719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.6e-39	144	204	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_027167719.1 144 PDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKNSA 204 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MKEMKDPEIK LFGKKIALLE NGKRILVVVP AAGEDSSGAS GGENSVGSDS DLSMDSRKAE 60 DEKDQEKRET ASDKDCPSGK LCSSEPRVKD PIAEELPILK SSSDSDGNSN NYSTDEDSPV 120 KQRPKAENDQ SDTTDSQQKT LKKPDKILPC PRCNSMDTKF CYYNNYNINQ PRHFCKSCQR 180 YWTAGGTMRN VPVGAGRRKN KNSASHCRHI TISEALQAAR IDTPNGFHHL NFKPNGTVLS 240 FGSDSPLCDS MASVLNLAEK KSPNGSQNGF YKLDHGISVS LKGTENGDDC SSGSSVTTSN 300 STVDGAKNGL QEPVMQQING FPSPVSCLPG VPWAFPWSST VPLPAICPPG FPMPFYPTPF 360 WNCGVPGAWS IPWLPPVFPT GNQKNSGSGP NSPTLGKHSR NGELIKQNNP EGKESQEQKA 420 SEGSILIPKT LRIDDPDEAA KSSIWTTLGI NYDSISRGGL FKALQPKGDE KKHLTTASPV 480 LQANPAALSR SVTFQESA

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MKEMKDPEIK LFGKKIALLE NGKRILVVVP AAGEDSSGAS GGENSVGSDS DLSMDSRKAE  60
DEKDQEKRET ASDKDCPSGK LCSSEPRVKD PIAEELPILK SSSDSDGNSN NYSTDEDSPV  120
KQRPKAENDQ SDTTDSQQKT LKKPDKILPC PRCNSMDTKF CYYNNYNINQ PRHFCKSCQR  180
YWTAGGTMRN VPVGAGRRKN KNSASHCRHI TISEALQAAR IDTPNGFHHL NFKPNGTVLS  240
FGSDSPLCDS MASVLNLAEK KSPNGSQNGF YKLDHGISVS LKGTENGDDC SSGSSVTTSN  300
STVDGAKNGL QEPVMQQING FPSPVSCLPG VPWAFPWSST VPLPAICPPG FPMPFYPTPF  360
WNCGVPGAWS IPWLPPVFPT GNQKNSGSGP NSPTLGKHSR NGELIKQNNP EGKESQEQKA  420
SEGSILIPKT LRIDDPDEAA KSSIWTTLGI NYDSISRGGL FKALQPKGDE KKHLTTASPV  480
LQANPAALSR SVTFQESA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-91	Dof family protein