PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027167827.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 878aa MW: 100760 Da PI: 8.4487

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027167827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.8	3.2e-22	72	162	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn Y+k GFsvrk+ +k+ ++g+ + r+fvCs+egkr+++ k+ ++ r+++aetr+ C a+l++k ek +k++vt++++eHnH++a XP_027167827.1 72 EFYNLYGKISGFSVRKADVTKK-DDGTAKYRKFVCSREGKRHKKWKShVNRFRQPKAETRMLCPACLRIKYEKsLNKYVVTEFVKEHNHKMA 162 6**************99887.8999***********998885677899**************989************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 878 aa Download sequence
MNDDEGKSLE FDLNIGDYSC WHMDSSDNGQ ENQSMQHFEG LSNERREDYI VDDMDVGEVM 60 NMSFESEEHA YEFYNLYGKI SGFSVRKADV TKKDDGTAKY RKFVCSREGK RHKKWKSHVN 120 RFRQPKAETR MLCPACLRIK YEKSLNKYVV TEFVKEHNHK MATKSSIKYL RSHRKVTDAD 180 YAQASTMRMA GAKTSQIMKY FAMQCGGYGN IGFVLKDLYN RVELEEKKET TNGDAEGAIG 240 YFTGRTATDP TFYFEYKVDI EGRLENIFWM DSVGQMDYKA FGDVLVFDST YNTNEYHKPL 300 VVLAGVNNHF GTIIFGSALL SEETTEAYEW ILGTLVKANG GKKPISVITD GDKSMRRAIE 360 NVLPNARHRL CTFHLKRNAE TGTNKCSMFT SMFAKFMKKA IPMEEFEEEW HAVVASCGLD 420 GNGWVKKMYA KRSLWAETLL RECFFAGMRS TQRCEQMNAF LKRYIKPNMR MYQFVKIHAL 480 ALDFLREKES KARHETEDTF LMLSTELHAL EQHAAETYTR NIFVNVRKHL GRQGLYDCFK 540 RENTGSGCLF YLAKYRDSRT WVVEMDKETR QMKCSCKKFE WKGLPCAHMF RVMVMENLQK 600 IPRTCIMKRW TKNAKEDIDV GGSLGTERLY DEMQQIARYG TLMTDCKGMC FYASHMGDGY 660 EAVRAVIHKE TEKWKETFVQ RGIGSQRGDG PSQLRTQAPR TAIRDPVRTI AKGDHRNKDK 720 NKHVKCGNCG RRDGHNKRTC QKGGNGPEVV WATHGSYEHN RIPTVLVSGY PASNEPFDGR 780 VLGGSNSHGI WDEASSDALG GSRACDHANQ YPAGTSNSRE SWAVQQHMQL SQSAYFFHNQ 840 EAAYYCNTEQ GGTHQGYEID QNGSQQHSNA FSHSFNWL

Sequence ? help Back to Top

Protein Sequence Length: 878 aa Download sequence

MNDDEGKSLE FDLNIGDYSC WHMDSSDNGQ ENQSMQHFEG LSNERREDYI VDDMDVGEVM  60
NMSFESEEHA YEFYNLYGKI SGFSVRKADV TKKDDGTAKY RKFVCSREGK RHKKWKSHVN  120
RFRQPKAETR MLCPACLRIK YEKSLNKYVV TEFVKEHNHK MATKSSIKYL RSHRKVTDAD  180
YAQASTMRMA GAKTSQIMKY FAMQCGGYGN IGFVLKDLYN RVELEEKKET TNGDAEGAIG  240
YFTGRTATDP TFYFEYKVDI EGRLENIFWM DSVGQMDYKA FGDVLVFDST YNTNEYHKPL  300
VVLAGVNNHF GTIIFGSALL SEETTEAYEW ILGTLVKANG GKKPISVITD GDKSMRRAIE  360
NVLPNARHRL CTFHLKRNAE TGTNKCSMFT SMFAKFMKKA IPMEEFEEEW HAVVASCGLD  420
GNGWVKKMYA KRSLWAETLL RECFFAGMRS TQRCEQMNAF LKRYIKPNMR MYQFVKIHAL  480
ALDFLREKES KARHETEDTF LMLSTELHAL EQHAAETYTR NIFVNVRKHL GRQGLYDCFK  540
RENTGSGCLF YLAKYRDSRT WVVEMDKETR QMKCSCKKFE WKGLPCAHMF RVMVMENLQK  600
IPRTCIMKRW TKNAKEDIDV GGSLGTERLY DEMQQIARYG TLMTDCKGMC FYASHMGDGY  660
EAVRAVIHKE TEKWKETFVQ RGIGSQRGDG PSQLRTQAPR TAIRDPVRTI AKGDHRNKDK  720
NKHVKCGNCG RRDGHNKRTC QKGGNGPEVV WATHGSYEHN RIPTVLVSGY PASNEPFDGR  780
VLGGSNSHGI WDEASSDALG GSRACDHANQ YPAGTSNSRE SWAVQQHMQL SQSAYFFHNQ  840
EAAYYCNTEQ GGTHQGYEID QNGSQQHSNA FSHSFNWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-97	FAR1 family protein