PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027168102.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

CPP

Protein Properties

Length: 360aa MW: 40917.2 Da PI: 5.7567

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027168102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	37.9	3.4e-12	74	109	5	40
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 gC Ck+s+C++ YCeC+ a+ Cs++CkCe+CkN++ XP_027168102.1 74 GCCCKRSRCIQGYCECYRANIICSKNCKCENCKNSR 109 8*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MYCLCFASGK YCDGCSCSNC QNTFENEEVR QASIGLILQR NQKAFRTMVV SSPECSQDSE 60 NGRKNALILV RYIGCCCKRS RCIQGYCECY RANIICSKNC KCENCKNSRA YEEISSKESK 120 KFEGHENFLD SHKKEQLDCM LPQSWPIFRE AAQGPLNFRF RSLLAEIIQL QNLMEFCELL 180 IVTSKAVNSL SDKGNPLNLE NLSHEQIVNS SSAQMESQDE RSENQGSKQD NNASLAQIDV 240 RCQDSTSNAI ILTERPRSPE TLHLMRNEKD MSLYPDASSD VALNQGCYLD VYIEQEKVVL 300 VKLRDFLNSL ITSGKAKDSE LLAGAKKANG REKFYPQFCD LESEMEKHEE VVQSLQHKTW

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MYCLCFASGK YCDGCSCSNC QNTFENEEVR QASIGLILQR NQKAFRTMVV SSPECSQDSE  60
NGRKNALILV RYIGCCCKRS RCIQGYCECY RANIICSKNC KCENCKNSRA YEEISSKESK  120
KFEGHENFLD SHKKEQLDCM LPQSWPIFRE AAQGPLNFRF RSLLAEIIQL QNLMEFCELL  180
IVTSKAVNSL SDKGNPLNLE NLSHEQIVNS SSAQMESQDE RSENQGSKQD NNASLAQIDV  240
RCQDSTSNAI ILTERPRSPE TLHLMRNEKD MSLYPDASSD VALNQGCYLD VYIEQEKVVL  300
VKLRDFLNSL ITSGKAKDSE LLAGAKKANG REKFYPQFCD LESEMEKHEE VVQSLQHKTW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25790.1	2e-23	CPP family protein