PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027168331.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 242aa MW: 25660 Da PI: 8.4827

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027168331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.9	3e-40	16	76	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s XP_027168331.1 16 EQEHLKCPRCDSANTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRS 76 57899****************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MQDPSIYSQM KPQFPEQEHL KCPRCDSANT KFCYYNNYNL SQPRHFCKNC RRYWTKGGAL 60 RNIPVGGGSR KNTKRSSSTT KRSSSATSAA PSTSPSSAAA VSSSSPPPST TPQTLPKTEP 120 YGLAPQALQP GFDQDRRMIL DVGGNGSFSS LLSSNGGQFG NFLEGLNPNA SNLQLCGFGD 180 HGPNQGPGGP GHHHGDPHAG LQNGSNSEEG FLSNQGNGDS SCWNGSSGWP DLAIYTPGSS 240 FQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	6e-40	Dof family protein