PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027168789.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

MYB_related

Protein Properties

Length: 464aa MW: 51755.7 Da PI: 4.0689

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027168789.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.8	2.4e-08	229	276	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +W++eE+e+++++v ++ W+ a +++ Rt k+++s+++++ XP_027168789.1 229 KWSEEEEEIFAEVVFSHPASlgrnFWNHSAIEFP-SRTKKEIVSYYFNV 276 8**************9999999******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MWVGEDGAAC DKKKGESDES LVDSNLAEFQ SYVEKEIDRS LACSISNSSW ATSTTCEEDV 60 RSGAPCILLS PNHYNLDFPA RTIFHTGDIY SSLLEYPPRK LVPIGSGFQA EIPEWCGCDD 120 EKLSSSSGDA FEVFNRSSQS LMSDIGNHLD HERQFSGSCL VPMPRSDMSE DTGEKLGDGR 180 IDCSCDDVGS VRCVRQHITE AREKLRKTLG QEAFVKLGFL EMGEVVAEKW SEEEEEIFAE 240 VVFSHPASLG RNFWNHSAIE FPSRTKKEIV SYYFNVFMLR RRAEQNRIDV LSIDSDNDEW 300 EGTNVSADEV IEKINGYDDS VVESPAEEDD HNEIFEDNLC EYKDDINAEE ASEDNIRLNL 360 DGSKCVSKES DMPPIDMPDN CSSDQAHQPL DQVLSDISGN QNTKHITSNL SSMSSSTGNE 420 LFLEPCSSKE WDVGCLTCPK DEDFLPTSSV IEEVFGAGAW NSRD

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MWVGEDGAAC DKKKGESDES LVDSNLAEFQ SYVEKEIDRS LACSISNSSW ATSTTCEEDV  60
RSGAPCILLS PNHYNLDFPA RTIFHTGDIY SSLLEYPPRK LVPIGSGFQA EIPEWCGCDD  120
EKLSSSSGDA FEVFNRSSQS LMSDIGNHLD HERQFSGSCL VPMPRSDMSE DTGEKLGDGR  180
IDCSCDDVGS VRCVRQHITE AREKLRKTLG QEAFVKLGFL EMGEVVAEKW SEEEEEIFAE  240
VVFSHPASLG RNFWNHSAIE FPSRTKKEIV SYYFNVFMLR RRAEQNRIDV LSIDSDNDEW  300
EGTNVSADEV IEKINGYDDS VVESPAEEDD HNEIFEDNLC EYKDDINAEE ASEDNIRLNL  360
DGSKCVSKES DMPPIDMPDN CSSDQAHQPL DQVLSDISGN QNTKHITSNL SSMSSSTGNE  420
LFLEPCSSKE WDVGCLTCPK DEDFLPTSSV IEEVFGAGAW NSRD