PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027169189.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 259aa    MW: 28952.3 Da    PI: 8.4604
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027169189.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.5e-1560108355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +grWvAeI+d s   ++ r +lg+f+ aeeAa a+++a + l+g
  XP_027169189.1  60 FLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDRAEEAALAYDNASRLLRG 108
                     67******.7*********42...36*********************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDGSMDAQSS KVQSQSQDPF TSLPLLPMMA TATPPESIEV QVDMESPRRE NITIHGRRRF  60
LGVRQRPSGR WVAEIKDSSQ KLRLWLGTFD RAEEAALAYD NASRLLRGRN AKTNFTYNGT  120
MDTREENLSL LGKNPRLYQL LKHAITKNLA KSSALDSSKS TRNFTDQRFC EGESSPVDHV  180
VTTVEDNIIG NEDHDQSQEK RGLRGISLGS SKVYSSVIVA PSFSASLSQG REEPENNSQG  240
TLFNSLFYQT NVMSHHKLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-25ERF family protein