PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027169269.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ZF-HD
Protein Properties Length: 178aa    MW: 19623.6 Da    PI: 8.1273
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027169269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer86.52.8e-27858457
     ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                      Y+eC++NhAa+lG +a+DGCgEf+++   ++++ al CaACgCHRnFHR+ +
  XP_027169269.1  8 EFYRECQRNHAANLGNYATDGCGEFLQD---QTSPGALLCAACGCHRNFHRKLT 58
                    67************************98...6789****************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MEGENANEFY RECQRNHAAN LGNYATDGCG EFLQDQTSPG ALLCAACGCH RNFHRKLTYG  60
ANYNRGSNSN QETATEMMEY SGGGDGGSGG GQQAAESPDR MSSKKRLRTK FTPDQKEKML  120
AFAEKLGWKL QRKDMEDEVE RFCSSIGVNR KVFKVWMHNH KNSSSASTSA GNASSLTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.14e-41ZF-HD family protein