PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027169306.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WOX
Protein Properties Length: 265aa    MW: 30713.8 Da    PI: 5.8439
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027169306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.93e-22100161157
                     TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     rr+R+++t++ql++Le++F + n +ps+e+ ++++++l    +++e++V++WFqNrRa++kk
  XP_027169306.1 100 RRQRWNPTAQQLQILERVFDQgNETPSKEKVKDITAELakhgQISESNVYNWFQNRRARMKK 161
                     89******************99***************************************8 PP
2Wus_type_Homeobox95.64.2e-31100163265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                         r+RW+Pt++Q++iLe+++++G  tP+ke++++itaeL+++G+i++ NV++WFQNr+aR ++kq
     XP_027169306.1 100 RRQRWNPTAQQLQILERVFDQGNETPSKEKVKDITAELAKHGQISESNVYNWFQNRRARMKKKQ 163
                        589***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MEYEKQKQHQ EERQKPQLLM EGQNIHGGNL NNGDDMFVKV MTDEQMEILG KQIAAYATIC  60
EQLEDLHRAL ISQNDPSHFM LRNPYLTPLM TTSSLHRIPR RQRWNPTAQQ LQILERVFDQ  120
GNETPSKEKV KDITAELAKH GQISESNVYN WFQNRRARMK KKQVVVEKKK TEPETQMVTE  180
SSLEEGEKLK PSEPMIEGQN YCVQKVSAGN SIFSFDEQGM EMQQPLFAIE GFHRGMSSDK  240
AKIHYLLEDM DVNPPGCYDP YLHAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155163RRARMKKKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.13e-48WOX family protein