PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027169363.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family MYB
Protein Properties Length: 329aa    MW: 37157.2 Da    PI: 5.6097
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027169363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.69e-16167212248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        WT+eEd  l++ v+ +G g W+ I++ ++ gR +kqc++rw+++l
   XP_027169363.1 167 EQWTPEEDRALIQHVENFGVGKWSQISKILQ-GRKGKQCRDRWHNHL 212
                      68*****************************.*************97 PP
2Myb_DNA-binding53.65.3e-17218260145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      ++ WT+eEd++lv+++++ G++ W  Ia++++ gRt++++k++w+
   XP_027169363.1 218 KDTWTEEEDKILVEVHAEIGSK-WVEIAKRLP-GRTENSIKNHWH 260
                      679*******************.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MELNKKCRDQ DSNQKLSLPT SSLEPEIHKE SWMDSNQAKD FLEDFPHLDD LPIAGSSSTA  60
DDFFDPLFNR SSTIGFEFLE YEPFEESDNN IGGLSIYNGM EAPVVDANLP DHNLIPSSHQ  120
QVNPMDISIQ GESSRIAADS GKFSNNAPPS LPRNPERVQN ITKSAKEQWT PEEDRALIQH  180
VENFGVGKWS QISKILQGRK GKQCRDRWHN HLMSDIKKDT WTEEEDKILV EVHAEIGSKW  240
VEIAKRLPGR TENSIKNHWH AATRRLFSGR KCSKKWPTPS ILLQNYIKSL HTEKDRNGSR  300
NASTSNAPSI AGQGESSVPD QDPMELSNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.11e-59MYB family protein