PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027169385.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 184aa MW: 20858.2 Da PI: 10.0557

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027169385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.5	4.7e-08	16	65	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54 + +Er+RR r++ ++eL +l+P+ + psk ls + ++ YI +L XP_027169385.1 16 KTVERNRRIRMKGLIHELTSLVPPqHFV-PSKElLSQRDQIDQVAAYIMQL 65 679*********************6664.5555599999999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MEINNVNDAS TKIDRKTVER NRRIRMKGLI HELTSLVPPQ HFVPSKELLS QRDQIDQVAA 60 YIMQLRERVE NLKKSKELVK SKIETKGTKS RNSAIPGSSI PIVKIREIGS NLEVVLVTGS 120 RKNFALHEVI LVLEEQGVEV VSISISTMDD KICHILHAQV KVSRLGVDTS TIYDKLQKLF 180 NYDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	1e-23	bHLH family protein