PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027170734.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family SBP
Protein Properties Length: 241aa    MW: 27014.7 Da    PI: 6.197
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027170734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1086.2e-34111195276
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS..........SEEETTT--SS--S-STTTT-------S- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs..........rfhelsefDeekrsCrrrLakhnerrrkk 76 
                     C++e+C+adl++ k+yh+rhkvCe h+ka+vv+v+gl+qrfCqqCs          rfh+lsefDe+krsCrrrLa+hnerrrk+
  XP_027170734.1 111 CRAENCKADLTDSKSYHKRHKVCEYHAKAEVVVVEGLKQRFCQQCSrsktwlyclsRFHDLSEFDEAKRSCRRRLAGHNERRRKH 195
                     9********************************************733333333337**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MEPHMHHLRQ SSSAVHSPFA PTKKVTEEAE TDTEEEEEEE EEEEVEEEEE EEEDGNGGFG  60
AEIEVEPELK KKRMNFDEGP RKRGSGTAAA AAEGAGGGGG GGVAVAPPPG CRAENCKADL  120
TDSKSYHKRH KVCEYHAKAE VVVVEGLKQR FCQQCSRSKT WLYCLSRFHD LSEFDEAKRS  180
CRRRLAGHNE RRRKHFTESR GEGSGRRGSN PGAKKDQCRQ VDERGRTPIV LPENHQKLHI  240
H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.13e-33SBP family protein