PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027170735.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

SBP

Protein Properties

Length: 231aa MW: 25776.2 Da PI: 5.9136

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027170735.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.1	8.2e-41	111	185	2	76
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 C++e+C+adl++ k+yh+rhkvCe h+ka+vv+v+gl+qrfCqqCsrfh+lsefDe+krsCrrrLa+hnerrrk+ XP_027170735.1 111 CRAENCKADLTDSKSYHKRHKVCEYHAKAEVVVVEGLKQRFCQQCSRFHDLSEFDEAKRSCRRRLAGHNERRRKH 185 9************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MEPHMHHLRQ SSSAVHSPFA PTKKVTEEAE TDTEEEEEEE EEEEVEEEEE EEEDGNGGFG 60 AEIEVEPELK KKRMNFDEGP RKRGSGTAAA AAEGAGGGGG GGVAVAPPPG CRAENCKADL 120 TDSKSYHKRH KVCEYHAKAE VVVVEGLKQR FCQQCSRFHD LSEFDEAKRS CRRRLAGHNE 180 RRRKHFTESR GEGSGRRGSN PGAKKDQCRQ VDERGRTPIV LPENHQKLHI H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	2e-36	SBP family protein