PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027170985.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 443aa MW: 47914.7 Da PI: 8.4146

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027170985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.5	1.5e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_027170985.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP
2	Myb_DNA-binding	72.1	8.5e-23	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_027170985.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MFHTKKPASA MNSHERPMSC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFSDHP IKDGERASTL ELQRSSSASS 120 SGMIGRSMND NVRITDAIRM QMEVQRRLHE QLEVQRHLQL RIEAQGKYMQ TILEKACQTL 180 AGENMASAAA AGSYNKGGNQ AGGGVVDIKE FGPPLSFPSL QDLNIYGSGE QLELQQGGMV 240 VDRSPSLDGF MSNNNDTQLC HLGKKRPTPP SPYGGGSGKS PASLMWSDHH HHHHHDLRLQ 300 ELGSAAASCL GNSQDHHHHH DPFKGDHHHQ IQMNNAAGGA GVLSLERSNV DVVIDSMSDS 360 TCSNMYETKP LISGSCGSDG GMVLGGTDQK NASSKLERPS PRRASTTATT PPPSSSSDHR 420 MNPVQIGTGA AGAMSQARNS PFG

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MFHTKKPASA MNSHERPMSC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA  60
TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFSDHP IKDGERASTL ELQRSSSASS  120
SGMIGRSMND NVRITDAIRM QMEVQRRLHE QLEVQRHLQL RIEAQGKYMQ TILEKACQTL  180
AGENMASAAA AGSYNKGGNQ AGGGVVDIKE FGPPLSFPSL QDLNIYGSGE QLELQQGGMV  240
VDRSPSLDGF MSNNNDTQLC HLGKKRPTPP SPYGGGSGKS PASLMWSDHH HHHHHDLRLQ  300
ELGSAAASCL GNSQDHHHHH DPFKGDHHHQ IQMNNAAGGA GVLSLERSNV DVVIDSMSDS  360
TCSNMYETKP LISGSCGSDG GMVLGGTDQK NASSKLERPS PRRASTTATT PPPSSSSDHR  420
MNPVQIGTGA AGAMSQARNS PFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	2e-94	G2-like family protein