PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027171153.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 147aa    MW: 17232.1 Da    PI: 10.1108
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027171153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.35.2e-2326113189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     kfY++YA ++ Fsvrk++ +k  +++ it+r++ C k+g +++ + +    +rtra t+tgC ak+ + + + + k++v++l+leHnHel
  XP_027171153.1  26 KFYKKYAFKMSFSVRKDYLNKD-KDDVITSRRYSCCKKGVKRKYEGD-AMPKRTRAPTKTGCGAKMIIVLLRgTMKYRVHDLVLEHNHEL 113
                     6*******************99.6667*************9999988.89999*************9999888****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MHCSKLTEDK IPELGMEFNS KEDAYKFYKK YAFKMSFSVR KDYLNKDKDD VITSRRYSCC  60
KKGVKRKYEG DAMPKRTRAP TKTGCGAKMI IVLLRGTMKY RVHDLVLEHN HELHIAQCSH  120
MMPSQRKVNE VQRFQPEISK DTGFSLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.12e-08FAR1 family protein