PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027171426.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 176aa MW: 19895.8 Da PI: 9.1573

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027171426.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.4	1e-17	81	171	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY Y + +G vrk +++k +ng + r +vC+keg+r+e++ + +++ r+++a r++Cka++k++ ++ ++k++v+++++ H H l+ XP_027171426.1 81 SFYMLYPRAIGIGVRKGYKRKD-KNGIVCLRSWVCNKEGERHEKHINkRDRIREPKAIRRVNCKARFKIRFDHvKQKYVVEEFVSRHCHRLC 171 59*************99998.8888999*******99987746778899**************9***************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MAIGQASSSR YIALNDKVED NGNRCKIINS TTCCIADRVT GQGDAGEHVS IGGGNEIAAF 60 GVIDDADVCS MVFESTKEAE SFYMLYPRAI GIGVRKGYKR KDKNGIVCLR SWVCNKEGER 120 HEKHINKRDR IREPKAIRRV NCKARFKIRF DHVKQKYVVE EFVSRHCHRL CSPESV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-12	FAR1 family protein