PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027171777.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 276aa    MW: 31556.9 Da    PI: 8.7912
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027171777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.31.9e-1661442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.............kvkaeekewyfFskrdkkyatgkrknratksg 81 
                     p  frF+P++eel+ + L  kv+++  e+ +++k+  +y   +ePwd                k + +++ +y F+k +k +  +k++ r+t+ g
  XP_027171777.1   6 PIRFRFRPSEEELI-FLLWLKVTNQLDEM-DHVKKKILYgeGAEPWDVLGdddvcwqfyddsgKRARTKRMVYVFTKLKKLS--SKKTARTTSLG 96 
                     5669**********.88999999988888.5566655552257****96346889988877542222344668888877654..6799******* PP

             NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +W +  k+ +v +  +ge++g +++L +  ++ +kg++  W+m ey +
  XP_027171777.1  97 TWDEETKSYPVEDMiTGEEIGSRRMLSYVLNSGSKGVNGGWIMPEYLV 144
                     ***********99889999***************************65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MVDNIPIRFR FRPSEEELIF LLWLKVTNQL DEMDHVKKKI LYGEGAEPWD VLGDDDVCWQ  60
FYDDSGKRAR TKRMVYVFTK LKKLSSKKTA RTTSLGTWDE ETKSYPVEDM ITGEEIGSRR  120
MLSYVLNSGS KGVNGGWIMP EYLVDGASLN GLNSSHNTDY VPCRTIKDDS KYTKVKESRK  180
IGKIAKEKEV GNRVRREVVL GKRKMSLGQE SSQVSKRSCN NPRNPMDEAK SSLITTQAIR  240
HMELPNLVNC DYDGDTRLLQ TYTGLLLDEG VQSMTY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.17e-08NAC family protein