PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027171831.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 173aa    MW: 20125.8 Da    PI: 9.719
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027171831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.54e-1459108155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+ykG r++k +g+W+AeIr  +     + kr++lg++   +eA +a++a r+++e 
  XP_027171831.1  59 SKYKGLRQRK-WGKWAAEIRNpF-----KgKRIWLGNYFI-KEASRAYEAKRLEFEA 108
                     89*******9.**********55.....45**********.************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MAEPTRPVRK IRVFCYDSDA TDTDSSDDER MIEKRPKRFL REIILPIVEL IRQPGFPSSK  60
YKGLRQRKWG KWAAEIRNPF KGKRIWLGNY FIKEASRAYE AKRLEFEARA MVDQSASEKY  120
SNVNHEYNNQ SSSMAVSQPH NQNDIPSCVF GDSAERLVGV RRICYSGYGF CGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-22ERF family protein